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Genomics and transcriptomics of enrichment cultures of marine methanotroph
The Iheya North Knoll in the mid-Okinawa Trough is a methane-rich deep-sea hydrothermal field. To cultivate methane-oxidizing bacteria from the Iheya North field, a continuous... -
Structure and function of picoplankton and virus communities along zonal grad...
Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)... -
EMG produced TPA metagenomics assembly of PRJEB48301 data set (Marine aquacul...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB48301, and was assembled with metaSPAdes v3.15.3. This project... -
metatranscriptomic approaches to unravel taxonomic and functional diversities...
Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and... -
EMG produced TPA metagenomics assembly of PRJNA385854 data set (Marine metage...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA385854, and was assembled with SPAdes v3.12.0 and megahit v1.2.9.... -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
Marine metagenomes from the bioGEOTRACES project
Marine metagenomes from the bioGEOTRACES project Metagenome -
Temporal sampling of marine metagenomes from Station ALOHA and BATS
This dataset has no description
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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Metagenomic analysis of marine coastal waters
Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using... -
Metagenomic investigation of six depths from the anchialine Bundera sinkhole
Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community... -
Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Trans...
One of the main concerns about the Arctic Ocean has been the changing sea ice regime with a reduction in the summer sea ice extent and a shift in dominance from thicker,... -
EMG produced TPA metagenomics assembly of the Coastal seawater microbial comm...
The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA441402. This project includes samples from... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
EMG produced TPA metagenomics assembly of PRJEB9742 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB9742, and was assembled with metaSPAdes v3.14.1. This project... -
Peruvian eddy shotgun metagenomes
Shotgun metagenomes sampled from a mesoscale water eddy during strong upwelling conditions in Eastern tropical South Pacific waters off the Peruvian coast, February to March 2013. -
Metagenomes of marine macroalgae, surrounding seawater and surrounding sediments
Here we analysed the microbial ecology of marine macroalgae, surrounding seawater, and surrounding sediment at Weihai, China (122.12 N, 37.56 E). Metagenomic sequencing of... -
EMG produced TPA metagenomics assembly of PRJEB9740 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB9740, and was assembled with metaSPAdes v3.15.3, metaSPAdes... -
EMG produced TPA metagenomics assembly of the seawater metagenome Genome sequ...
The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA320927. This project includes samples from... -
Metatranscriptome of an algal bloom from St Helena Bay on the west coast of S...
The aim of this project is to investigate changes in gene expression specifically genes linked to PCD the duration of an algal bloom event. The study was motivated by the...
