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Genomics and transcriptomics of enrichment cultures of marine methanotroph
The Iheya North Knoll in the mid-Okinawa Trough is a methane-rich deep-sea hydrothermal field. To cultivate methane-oxidizing bacteria from the Iheya North field, a continuous... -
Baltic Sea Surface Water Metagenome
Surface water collected in the Baltic Proper, 10 km east of Oland in the Baltic Proper (N 5655.851, E 1703.640) -
Structure and function of picoplankton and virus communities along zonal grad...
Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)... -
metatranscriptomic approaches to unravel taxonomic and functional diversities...
Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and... -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
Marine metagenomes from the bioGEOTRACES project
Marine metagenomes from the bioGEOTRACES project Metagenome -
EMG produced TPA metagenomics assembly of PRJEB1788 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1788, and was assembled with SPAdes v3.14.1, metaSPAdes v3.14.1.... -
Temporal sampling of marine metagenomes from Station ALOHA and BATS
This dataset has no description
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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Metagenomic analysis of marine coastal waters
Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using... -
Metagenomic investigation of six depths from the anchialine Bundera sinkhole
Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community... -
EMG produced TPA metagenomics assembly of PRJEB52452 data set (Malaspina Expe...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB52452, and was assembled with metaspades v3.15.3. This project... -
a take on the impact of pollution on coastal bacterial communities
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for... -
EMG produced TPA metagenomics assembly of PRJNA237344 data set (Amazon Contin...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA237344, and was assembled with SPAdes v3.11.1, SPAdes v3.12.0.... -
seawater sample Metagenome
Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the... -
Amplicon sequencing of Tara Oceans Polar Circle DNA samples corresponding to ...
Analysis of 18S DNA in Tara Oceans Polar Circle Protists size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small and large cell... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
Bermuda Atlantic Time-series Study metagenomes
Metagenome-assembled genome bins to assess the diversity and evolution of globally abundant deep-ocean bacteria. -
Peruvian eddy shotgun metagenomes
Shotgun metagenomes sampled from a mesoscale water eddy during strong upwelling conditions in Eastern tropical South Pacific waters off the Peruvian coast, February to March 2013. -
EMG produced TPA metagenomics assembly of PRJEB1788 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1788, and was assembled with SPAdes v3.14.1, metaSPAdes v3.14.1....
