Dataset - B2FIND

Genomics and transcriptomics of enrichment cultures of marine methanotroph

The Iheya North Knoll in the mid-Okinawa Trough is a methane-rich deep-sea hydrothermal field. To cultivate methane-oxidizing bacteria from the Iheya North field, a continuous...

Structure and function of picoplankton and virus communities along zonal grad...

Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)...

metatranscriptomic approaches to unravel taxonomic and functional diversities...

Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and...

Marine metagenomes from the bioGEOTRACES project

Marine metagenomes from the bioGEOTRACES project Metagenome

Temporal sampling of marine metagenomes from Station ALOHA and BATS

This dataset has no description

Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects

The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal...

Metagenomic analysis of marine coastal waters

Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using...

Metagenomic investigation of six depths from the anchialine Bundera sinkhole

Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community...

seawater sample Metagenome

Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the...

EMG produced TPA metagenomics assembly of the Marine microbial communities fr...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330145. This project includes samples from...

marine metagenome Metagenome

To study the effect of diesel oil spills on microbial communities in the monitored basin experiment

Pelagic sediment metagenome of Gulf of Khambhat

Community structure and pollutant degradation ability of deep sediment microflora of Gulf of Khambhat using culture independent approach

HBC thrombolite metagenome

Metagenome of a intertidal thrombolitic mat community from Highborne Cay, Bahamas.

Metagenomic investigation of the coastal region of south Gujarat using soil s...

metagenomic investigation of the coastal region of south Gujarat. Soil and water samples were collected and pooled from three different location; dandi, umargam and nargol. From...

Metatranscriptome of an algal bloom from St Helena Bay on the west coast of S...

The aim of this project is to investigate changes in gene expression specifically genes linked to PCD the duration of an algal bloom event. The study was motivated by the...

EGB sediment data (raw sequence reads)

DNA and RNA from sediment samples collected in the Eastern Gotland Basin

EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods

This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB...