-
metatranscriptomic approaches to unravel taxonomic and functional diversities...
Two previous integrative research programs: PREDHYPO (AMIDEX Foundation 2015-2016) and PREDHYP-O2 (EC2CO 2016-2017, CNRS-INSU) have enabled the coupling between physics and... -
Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
EMG produced TPA metagenomics assembly of PRJEB52452 data set (Malaspina Expe...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB52452, and was assembled with metaspades v3.15.3. This project... -
a take on the impact of pollution on coastal bacterial communities
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for... -
Metagenome assembly of PRJNA822508 data set (Metagenomic exploration of Surfa...
The Third Party Annotation (TPA) assembly was derived from the primary data set PRJNA822508 -
metabarcoding of eDNAbyss sediment samples
Sediments were collected using multicore sampler, or simple cores when a submarine or a remote operated vehicle (ROV) were present. The cores were collected and sliced according... -
EMG produced TPA metagenomics assembly of PRJNA777294 data set (Tracking Geno...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA777294, and was assembled with metaspades v3.15.3. This project... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
EGB sediment data (raw sequence reads)
DNA and RNA from sediment samples collected in the Eastern Gotland Basin -
EMG produced TPA metagenomics assembly of the Shotgun Sequencing of Tara Ocea...
The APY Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1787. This project includes samples from the following biomes... -
EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB... -
metabarcoding of eDNAbyss sediment samples
Sediments were collected using multicore sampler, or simple cores when a submarine or a remote operated vehicle (ROV) were present. The cores were collected and sliced according... -
EMG produced TPA metagenomics assembly of PRJEB4352 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB4352, and was assembled with megahit v1.2.9. This project... -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
Metagenome assembly of PRJNA822508 data set (Metagenomic exploration of Surfa...
The Third Party Annotation (TPA) assembly was derived from the primary data set PRJNA822508
