184 datasets found

Complete cell count, nutrient concentration, and radiotracer data for culture incubations and results presented in the manuscript "Carbon recycling efficiency and phosphate...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365016. This project includes samples from...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA373808. This project includes samples from...

The Stiffkey_Saltmarsh_Sediment_SIP_Organosulfur Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1760. This project...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366386. This project includes samples from...

Surface water collected in the Baltic Proper, 10 km east of Oland in the Baltic Proper (N 5655.851, E 1703.640)

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366384. This project includes samples from...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330126. This project includes samples from...

The Jacarepagua lagoon is a coastal shallow water body in the Rio de Janeiro city (Brazil) historically contaminated by Microcystins ("MCs" - toxin produced by cyanobacteria...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330113. This project includes samples from...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB48301, and was assembled with metaSPAdes v3.15.3. This project...

Checking reference metagenome

During expedition EMB201 in the Baltic Sea we investigated the local producers of glycerol dialkyl glycerol tetraethers (GDGT) and their thriving depth by a combined 16S rRNA...

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA329990. This project includes samples from...

Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages)...

Archaeal lipids in marine sediments are important biomarkers widely used as indicators of paleoclimate and benthic archaeal ecology. However, the relative contributions of...

For the analysis of suspended particulate matter, 5-10 L of lake water was collected at 13 discrete depths between the lake surface and 90 m depth, monthly between September...

Archaea occupy an important niche in the global carbon cycle and their lipids are widely used as indicators of environmental conditions in both paleoenvironmental and modern...

Thaumarchaeota are one of the most abundant groups of Archaea in the marine water column. Their membrane consists of isoprenoid glycerol dibiphytanyl glycerol tetraethers...

CARD-FISH was performed as previously described in Ruff et al., (2013; doi:10.1371/journal.pone.0072627) with the following modifications. 4-6 µl of 25-fold diluted sediment...