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<b>Spatiotemporal mapping of the contractile and adhesive forces sculpting ea...
Embryo shape is determined by individual cell mechanics, intercellular interaction strength, and geometrical constraints. Models based on surface tensions at cell interfaces can... -
<b>GFAP Degradome Foundation Atlas</b>
This open-access repository introduces the Glial Fibrillary Acidic Protein (GFAP) Degradome Foundation Atlas. This comprehensive dataset annotates proteolytic GFAP fragments... -
Foldclass databases for protein structural domains in CATH and TED
This repository contains databases of protein domains for use with Foldclass and Merizo-search. We provide databases for all 365 million domains in TED, as well as all... -
Stromal and Oncogenic Regulation of Colonic Stem Cells Revealed by Single-cel...
Poster presented at the 2022 UCL Cancer Domain Symposium. Awarded with the First Prize Runner-up. -
Sequence alignment programs
Very basic programs created in MATLAB to align either nucleotide or protein sequences. -
RNA seq - PDPN/CLEC-2 transcription in FRCs
Raw data to accompany figure 2 - Effects of CLEC-2 on ECM production by FRCsIncludes sample list in all format and and fastq files from RNAseq runs.Data set 28GBAbstractLymph... -
HEGP Challenge Dataset 1
Encrypted Dataset #1 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. Dataset comprises encrypted genotypes of 500 subjects at... -
Extracellular Matrix Remodelling during Lymph Node Expansion - #EMBOmesenchym...
Presentation from EMBO workshop - Mesenchymal cells in inflammation and Cancer - Athens May 2019 -
Persistent T Cell Repertoire Perturbation and T Cell Activation in HIV After ...
T cell receptor sequence data of 26 people living with HIV on long-term anti-retroviral therapy, and 12 HIV-negative healthy controls, produced using the UCL Chain lab protocol.... -
Changes in ESCRT-III filament geometry drive membrane remodelling and fission...
These are the data sets required to generate the figures in our paper 'Changes in ESCRT-III filament geometry drive membrane remodelling and fission in... -
Protein structures predicted using DMPfold2, plus training data
This dataset comprises predicted protein structures from the paper "Ultrafast end-to-end protein structure prediction enables high-throughput exploration of uncharacterized... -
Data for manuscript 'GMP compliant isolation of mucosal epithelial cells and ...
Data points for figure 1, 2, 3, 4 and 6. GraphPad Prism 8 files -
Example Software in R for Homomorphic Encryption
# HEGP.example.R # Author: Richard Mott, UCL Genetics Institute. # (C) 2019 Richard Mott # The function CFW.example() will download public data from Nicod et al 2016 Nature... -
Gap Analysis - spatial description of network spaces
MATLAB https://www.actonlab.co.uk/gap-analysis-matlab/ Instructions to carry out gap analysis on network images. Previously used in https://www.nature.com/articles/nature13814 -
Wild type transketolase dynamics
MD simulation of wild-type E.coli transketolase. Carried out in Gromacs by Haoran Yu. Published in Scientific Reports in 2017 Haoran Yu, Yihan Yan, Cheng Zhang, Paul A. Dalby... -
Imputation and QTL Mapping in Multiparental Crop Populations from Low Coverag...
Posters describing the use of low-coverage sequence data to impute genotypes in multiparental populations of wheat and rice. The posters also show results from an integrated... -
Cell tracking reference dataset
Raw microscopy images and associated data used for validation of cell tracking algorithms. -
HEGP Challenge Dataset 2
Encrypted Dataset #2 for the HEGP Challenge, see https://github.com/encryption4genetics/HEGP-website for more details. IMPORTANT UPDATE 09/10/2020Data have been replaced with... -
TEM and ET datasets for: Validation of a stereological method for estimating ...
TEM images and ET z-stack (ET11) used for computing the size and density of cerebellar MFT vesicles and GC nuclei. ImageJ/Fiji particle outlines are included. -
Proposed pathways and protein-protein interaction networks in age-related mac...
CellDesigner files describing pathogenesis pathways and Cytoscape files describing protein-protein interactions of potential relevance in age-related macular degeneration.By...
