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Foraminiferal nitrate respiration in oxygen minimum zones - past and present ...
Foraminiferal samples were taken at the oxygen minimum zone off Peru to identify their genetic repertoire for denitrification and associated bacterial communities. -
Comparing shotgun vs. amplicon sequencing analysis of environmental samples o...
New applications of DNA and RNA sequencing are expanding the field of biodiversity discovery and ecological monitoring, yet questions remain regarding precision and efficiency.... -
Bacterial microbiomes in phoronids
16S rRNA sequencing of whole phoronids, isolated phoronid tubes, and isolated phoronid tissues. -
Gut microbial communities of Pacifastacus leniusculus collected from Lake Erk...
The goal of this study was to investigate how host traits affect the gut microbiome. Specifically, this study tested how life stage and sex influence the effect of diet on gut... -
Sequestration of Methane by Symbiotic Deep-Sea Annelids
Demonstration of animal-bacterial symbioses fueled by methane in two annelid species (a serpulid Laminatubus and sabellid Bispira) and Methylococcales bacteria. Samples were... -
Marine Malassezia Survey
This project uses primers that are biased towards Malassezia to survey marine environmental and host-associated samples to determine the diversity and distribution of putative... -
Metagenome common snook larvae
The goal of the study was to use probiotics as a bacterial management strategy during larval stages of common snook aquaculture production. These stages experience mass... -
The effect of a symbiotic partnership on mucosal surface microbiomes
We monitored the external mucosal microbiome of the clownfish Amphiprion clarkii upon the establishment of a symbiotic relationship (termed hosting) with the anemone Entacmaea... -
Marine Microbial Biofilms Amplicon Raw sequence reads
Marine microbial biofilms conditioned on concrete tetrahedral blocks deployed in aquaria and reef conditions for one, two, and three months. Microbial biofilms were used in... -
sea cucumber metagenome Raw sequence reads
Sea cucumber microbial community -
Metazoan-Fungal Symbiosis
This study explored the co-occurrence of fungi and metazoans (namely seals and brittle stars) with high-throughput sequencing -
Planktonic and intestinal bacteria in Penaeus vannamei aquaculture (E)
Planktonic and intestinal bacteria in Penaeus vannamei aquaculture (package 1) -
Microscopic Marine Invertebrate Microbiomes
Characterising the microbiome composition of the world's smallest animals covering 21 host phyla. Animals were isolated from three habitats (sediment, macroalgae and water) and... -
Didemnum vexillum tunic microbiome Raw sequence reads
16S rRNA amplicon sequencing of Didemnum vexillum tunic microbiome Casso, M. Turon, M. Marco, M. Pascual, M. Turon X. (2020) The microbiome of the worldwide invasive ascidian... -
Host and parasite microbiome composition Raw sequence reads
Whitefishes and cestodes Proteocephalus exiguus parasitizing the intestine of fish -
Seasonal changes in microbial communities associated with the jewel anemone C...
Here we explore the bacterial community structure, and its changes across different seasons, associated with the jewel anemone Corynactis viridis, an anthozoan Cnidaria that is... -
Microbiome shifts associated with the introduction of wild Atlantic horseshoe...
The Atlantic horseshoe crab (Limulus polyphemus) is a common marine aquarium species and model organism for research. There is potential monetary and conservation value in... -
crab larval metagenome, rotifer metagenome and tank water metagenome
Variation of rearing water bacterial communities was responsible for the impact of Probiotic application in crab hatchery -
Botryllus schlosseri microbiome
The microbiome of tunicate Botryllus schlosseri -
Bacteria transmission in Nematostella vectensis
Microbial communities confer multiple beneficial effects to their multicellular hosts. To evaluate the evolutionary and ecological implications of the animal-microbe...