49 datasets found

Raw Illumina Miseq sequences (12S mitochondrial), from water samples in the Irish and Celtic seas. Primers are for 12S V5, (Riaz et al., 2011).

The project envisages to address the poor larval growth, quality, and survival rates of commercially important maricultured finfishes of India through a holistic approach...

Optimized strategic analysis to be carried out on three fronts: (1) on the viability and economic performance of the fishing fleets, (2) on the social dimension of the fishing...

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This study suggests using the NGS analysing and microbiome characterization of marine fish tissues as a tool for identification and monitoring specific pathogens. Our work is an...

Environmental DNA (eDNA) has become a convenient monitoring method of biodiversity for past decade. In aquatic environment, most of study is focused on river and coastal area...

Microbiome development in greater amberjack fed with different starting diets

Effects of heat-inactivation of the probiotic strain Shewanella putrefaciens Ppd11 on Solea senegalensis intestinal microbiota

Environmental DNA and subsequent metabarcoding are useful tools for assessing marine fish biodiversity in a non-invasive manner. It is of particular importance to assess...

This study was designed to analyze the bacterial composition of the Oreochromis niloticus and the impact of its surrounding water. Nile tilapia fish samples were obtained from...

Raw sequence reads from the light organs of Siphamia fishes containing symbiotic bioluminescent bacteria

Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that...

Prophylactic antibiotics in the aquaculture industry are intended to prevent disease and provide an alternative to vaccination. Research in mice and humans suggests antibiotics...

fish skin mucosal microbiota Raw sequence reads

The data from this project was used to determine what bacteria are prevalent in different Atlantic salmon RAS hatchery systems in Tasmania and which taxa successively transfer...

We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of...

Characterization of the microbiota from the gut tissue and the gut content of the notothenioid fish genus Harpagifer sp.

In this study, we report a deeply sequenced metatranscriptome from the anterior part of gilthead sea bream intestinal mucus with three objectives: i) to study and characterize...

Gut Microbiome of tilapia at different stages after fecal microbiota transplantation

The data in this project is part of CIRCLES: Controlling mIcRobiomes CircuLations for bEtter food Systems. CIRCLES is a European Union Horizon 2020 research and innovation...