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Effects of parental benzo[a]pyrene exposure on offspring sperm methylation in...
WGBS is used to identify the methylation modifications in F1 sperm after F0 adults were exposed to benzo[a]pyrene -
Genome-wide transcriptome analysis of the brain (ventral part of telenchephal...
Expression profile of the brain (ventral part of telenchephalon, hypothalamus and pituitary) of medaka (Oryzias latipes) kept under outdoor natural conditions were obtained by... -
Molecular signaling pathways elicited by 17a-ethinylestradiol in Japanese med...
Estrogenic contaminants are continuously released into water bodies causing alterations in the reproductive morphology and physiology of aquatic organisms. Exposure of fish to... -
Global transcriptional response in Japanese medaka larvae following embryonic...
A global RNA-Seq analysis was conducted using RNA isolated from the axial region of DMSO- and 0.3 nM TCDD-exposed medaka to identify targets within the osteochondral pathway... -
cis-regulatory logic of Shh expression reveals common history of unpaired and...
Despite their evolutionary, developmental, and functional importance the origin of vertebrate paired appendages remains a mystery. Classical ideas center on three hypotheses:... -
A Yap-dependent transcriptional program directs cell migration for embryo axi...
The assembly of the embryo’s primary axis is a fundamental landmark to establish the vertebrate body plan. Although the morphogenetic movements directing cell convergence... -
miRNA expression profile in Medaka2
We perform miRNA expression profile across varios tissues of medaka -
left arm of chr19 sequencing, DENA-induced mutation frequency in medaka cultu...
Rev1 has dCMP activity, which function as inserter at the abasic site. In addition to acting as an inserter, Rev1 plays an essential role in the insertion step functioning as a... -
Population genomic analysis of RAD-tags identifies sex-linked markers in zebr...
RAD-tags from zebrafish strains AB, Tuebingen, Nadia, WIK, Ekkwill, and Cooch behar were sequenced to identify SNPs. These SNPs were analyzed to identfy sex-linked loci in each... -
Oryzias latipes strain:drR Transcriptome or Gene expression
RNA-seq of isolated gonadotrope cells -
TCR alpha and beta repseq
TCR Repertoire sequencing raw reads TCR alpha and beta for several species -
Hepatic transcriptome and epigenome in response to high-fat diet
Nutritional state in early life can pose life-long effects on the metabolism of animals, although the mechanism underlying long-term nutritional memory is unclear. Epigenetic... -
miRNA expression profile in Medaka
We perform miRNA expression profile across varios tissues of medaka -
Oryzias latipes strain:HdRr Raw sequence reads
To understand how acidified environments affect the fish through inter-tissue crosstalk -
Transcriptome profile of Stage 40 Oryzias latipes (Medaka) embryos
Transcriptomic profile of Stage 40 Oryzias latipes (Medaka) embryos wild type and KO for SEDL Overall design: Total RNA was extracted from n=3 SEDL Knock Out stage 40 embryos... -
Comparative Transcriptomic Analysis of Adult Medaka Tissues Sampled after Ada...
To understand how humans adapt to space environments, many experiments can be conducted on astronauts while they work aboard the Space Shuttle or the International Space Station... -
Medaka_Reciprocal_cross_RNAseq
Medaka fish is a long standing genetic model organism from the 1930s. Uniquely amongst vertebrates Medaka fish can be routinely inbred from the wild (laboratory mice are inbred,... -
Transcriptome analysts of a growth domain and a differentiated domain of the ...
Medaka gill filaments contain stem cells in their most apical domains and differentiated cells of diverse lineages in central and basal domains. We aim at identifying... -
Identification and functional analysis of yap1b: a new Yap family member in t...
The vertebrate paralogs Yap1 and Taz are well known Hippo pathway effectors playing a key regulatory process in growth, morphogenesis, cell survival and cancer progression. Upon... -
Epigenetically distinct synaptic architecture in clonal compartments in the t...
The telencephalon is an essential brain part for cognitive functions and it exhibits high anatomical diversity across different vertebrate classes. In mammals, the dorsal...