45 datasets found

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project...

Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for...

plankton community structure and diversity in the coastal waters of Qinhuangdao

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA237344, and was assembled with SPAdes v3.11.1, SPAdes v3.12.0....

Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA649049, and was assembled with metaSPAdes v3.14.1. This project...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB6608, and was assembled with metaSPAdes v3.14.1 and megahit...

Shotgun metagenomes sampled from a mesoscale water eddy during strong upwelling conditions in Eastern tropical South Pacific waters off the Peruvian coast, February to March 2013.

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project...

Here we analysed the microbial ecology of marine macroalgae, surrounding seawater, and surrounding sediment at Weihai, China (122.12 N, 37.56 E). Metagenomic sequencing of...

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB9740, and was assembled with metaSPAdes v3.15.3, metaSPAdes...

The aim of this project is to investigate changes in gene expression specifically genes linked to PCD the duration of an algal bloom event. The study was motivated by the...

Surface water from areas experiencing harmful algal blooms were collected either at the beginning or during the termination of the bloom. The water was size fractionated, and...

DNA and RNA from sediment samples collected in the Eastern Gotland Basin

The APY Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1787. This project includes samples from the following biomes...

The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season.

Marine dissolved organic matter (DOM) contains nearly as much carbon as the Earths atmosphere. To investigate the roles of planktonic marine microbes in the biogeochemical...

This study includes experiments from the following five sequencing strategies: 1) Shotgun DNA sequencing; 2) Amplicon sequencing after 18S amplification by PCR using 1391F/EukB...

Marine metagenomes from the bioGEOTRACES project Metagenome

Plankton community structure and diversity in the coastal waters of Rongcheng, China