74 datasets found

Complete genome sequences of organisms are the foundation of understanding biological functions. High-throughput parallel sequencing technologies such as Illumina make the...

Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics....

Whole genome sequencing of foodborne pathogens isolated from retail seafood as part of the US Food and Drug Administration surveillance project for NARMS

The study aims to study the genetic diversity of rescued vanilla accessions within a collection in Madagascar

The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms...

Profiling of Contaminated Soils in a Typical Antimony Mining Site

Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of bacteria contaminating hospital intensive care unit surfaces in two...

This project is designed to uncover antimicrobial drug leads from human symbionts.

Genome sequencing of Bacillus isolates.

Antibiotic resistanct organisms isolated from hospital surfaces or patient stool or blood culture isolates

Salmonella enterica genomes sequenced as part of PulseNet USA surveillance for foodborne disease

http://www.sanger.ac.uk/resources/downloads/bacteria/escherichia-coli.html This data is part of a pre-publication release. For information on the proper use of pre-publication...

Contains next-generation sequencing (NGS) data of pathogens isolated from soil and groundwater, used for validating the VF-KNN method in the paper 'A Virulence Factor Gene-Based...

The use of NGS-based testing of the bacterial microbiota is often impeded by inconsistent or non-reproducible results, especially when applying different analysis pipelines and...

University of California at Davis 100K Pathogen Genome Project. Major bacterial pathogens in the United States and around the world, including Salmonella enterica, E. coli,...

Experimental data related to the study analyzing the effects of extracellular vesicles (EVs) derived from probiotic and commensal E. coli strains on liver function via the...

This repository contains the data collected for the manuscript "Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity". The...

Wellcome/DfID grant with icddr,b This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

The study looked at the characteristics of Enterobacteriaceae obtained from fecal samples of marine mammals. The strains were genome sequenced for species assignation, typing,...