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Global Ocean Sampling Expedition
Collection of metagenomes obtained during the Global Ocean Sampling Expedition -
Amplicon sequencing of Tara Oceans DNA samples corresponding to size fraction...
Seawater was filtered from different depths to retain small cell sizes (Girus Organisms). The DNA was extracted and amplified by PCR. -
EMG produced TPA metagenomics assembly of PRJNA385854 data set (Marine metage...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA385854, and was assembled with SPAdes v3.12.0 and megahit v1.2.9.... -
California Current Cruise CCE-P1408 Process Cruise #6
Passive sinking of particulate organic matter (POM) is the main mechanism through which the biological pump transports surface primary production to the ocean interior. However,... -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
Marine metagenomes from the bioGEOTRACES project
Marine metagenomes from the bioGEOTRACES project Metagenome -
EMG produced TPA metagenomics assembly of PRJEB1788 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1788, and was assembled with SPAdes v3.14.1, metaSPAdes v3.14.1.... -
EMG produced TPA metagenomics assembly of the particle-associated bacteria fr...
The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA318731. This project includes samples from... -
Temporal sampling of marine metagenomes from Station ALOHA and BATS
This dataset has no description
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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Metagenomic analysis of marine coastal waters
Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using... -
EMG produced TPA metagenomics assembly of the Coastal seawater microbial comm...
The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA441393. This project includes samples from... -
Metagenomic investigation of six depths from the anchialine Bundera sinkhole
Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community... -
EMG produced TPA metagenomics assembly of the Coastal seawater microbial comm...
The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA441395. This project includes samples from... -
EMG produced TPA metagenomics assembly of PRJNA656268 data set (Bio-GO-SHIP: ...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project... -
EMG produced TPA metagenomics assembly of PRJEB52452 data set (Malaspina Expe...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB52452, and was assembled with metaspades v3.15.3. This project... -
EMG produced TPA metagenomics assembly of the Aerobic enrichment media from B...
The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366673. This project includes samples from... -
EMG produced TPA metagenomics assembly of the Estuarine microbial communities...
The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365257. This project includes samples from... -
a take on the impact of pollution on coastal bacterial communities
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for... -
Aarhus Bay Station M5 sediment metagenome sequencing
ANME-1 draft genome binned from Aarhus Bay M5 sediment metagenome samples (Bioproject PRJNA305566)
