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Global Ocean Sampling Expedition
Collection of metagenomes obtained during the Global Ocean Sampling Expedition -
EMG produced TPA metagenomics assembly of PRJNA385854 data set (Marine metage...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA385854, and was assembled with SPAdes v3.12.0 and megahit v1.2.9.... -
Short-term variability in the microbial, nano- and picoplankton dynamics duri...
The diversity and functionality of the organisms in the 10-0.2 m size range was studied at a fixed-point sampling site in St Helena Bay during the end of upwelling season. -
Marine metagenomes from the bioGEOTRACES project
Marine metagenomes from the bioGEOTRACES project Metagenome -
EMG produced TPA metagenomics assembly of PRJEB1788 data set (Shotgun Sequenc...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB1788, and was assembled with SPAdes v3.14.1, metaSPAdes v3.14.1.... -
Temporal sampling of marine metagenomes from Station ALOHA and BATS
This dataset has no description
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Bio-GO-SHIP: Global marine 'omics studies of repeat hydrography transects
The Global Ocean Shipboard Hydrographic Investigations Program (GO-SHIP) is a ship-based global survey of ocean hydrographic sections, which are repeatedly measured on a decadal... -
Baltic Sea metagenome assembly and MAG data sets: Coastal transect 2015 and L...
Reads for two datasets, assemblies and MAGs for these datasests as well as two other (PRJEB22997 and SRP077551) for the study named "Ecosystem-wide metagenomic binning enables... -
Amplicon 18S rRNA Illumina TAGs from Malaspina Bathypelagic samples
Bathypelagic samples collected during the global circumnavigation Expedition Malaspina 2010 were generated by amplifying the 18S rRNA gene using primers XXXXX and XXXX.... -
Metagenomic analysis of marine coastal waters
Marine coastal environment hosts a complex diversity of bacteria and archaea. Here we studied the spatial and temporal dynamic of their genomes populations and functions using... -
EMG produced TPA metagenomics assembly of PRJEB43687 data set (Shotgun metage...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB43687, and was assembled with metaSPAdes v3.14. This project... -
Metagenomic investigation of six depths from the anchialine Bundera sinkhole
Bundera sinkhole is an anchialine ecosystem located in north-western Australia. It has a highly stratified physico-chemical profile which is reflected in the microbial community... -
EMG produced TPA metagenomics assembly of PRJNA656268 data set (Bio-GO-SHIP: ...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA656268, and was assembled with metaSPAdes v3.15.2. This project... -
EMG produced TPA metagenomics assembly of PRJEB52452 data set (Malaspina Expe...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB52452, and was assembled with metaspades v3.15.3. This project... -
a take on the impact of pollution on coastal bacterial communities
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for... -
EMG produced TPA metagenomics assembly of PRJNA237344 data set (Amazon Contin...
The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA237344, and was assembled with SPAdes v3.11.1, SPAdes v3.12.0.... -
seawater sample Metagenome
Ocean Acidification: microbes as sentinels of adaptive responses to multiple stressors: contrasting estuarine and open ocean environments Seawater samples collected from the... -
PETROMAKS E#12
The aim of the study was to asses biodegradation efficiency of dispersed oil of two Norwegian seawater sources. One source of seawater used in the study was local... -
EMG produced TPA metagenomics assembly of the Marine microbial communities fr...
The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330128. This project includes samples from... -
Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Trans...
One of the main concerns about the Arctic Ocean has been the changing sea ice regime with a reduction in the summer sea ice extent and a shift in dominance from thicker,...
