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20Mammals
Definition of functional regulatory regions in the vast non-coding fractions of mammalian genomes remains a daunting challenge that underscores our limited understanding of... -
Assembly of the Kenya Pig and Warthog Genome
Assembly genome of common Warthog and Kenya Pig by Illumina 10X genomics -
Comparative analysis of genome-scale, base-resolution DNA methylation profile...
We mapped DNA methylation in 580 animal species (535 vertebrates, 45 invertebrates), resulting in 2443 genome-scale, base-resolution DNA methylation profiles of primary tissue... -
Mining microbial metatranscriptomes for expression of antibiotic resistance g...
We use a novel approach (an analysis of metatranscriptomics data) to study antibiotic resistance, a topic that poses major health care concerns. We investigate resistance gene... -
RNA-Seq analysis of gene expression divergence in mammalian liver
The connection between evolution of regulatory elements and downstream gene expression is incompletely understood in mammals. We carried out a large-scale comparison of matched... -
Gut vertebrate gut archaeal community assessment via archaea-targeting 16S rR...
Commonly used 16S rRNA primers miss much of the archaeal diversity present in the vertebrate gut, leaving open the question of which archaea are host associated, the... -
Raw sequence reads from Danish species
Raw reads from samples of danish species, sequenced with the purpose of assembling mito genomes for future references. -
Mitochondrial heteroplasmy in vertebrates using ChIP-sequencing data
Mitochondrial heteroplasmy, the presence of more than one mtDNA variant in a cell or individual is not as uncommon as previously thought. It is mostly due to the high mutation... -
Germline mutation rate in vertebrates
We estimated the germline mutation rate of 68 species of vertebrates using WGS of pedigrees (i.e. at least 3 individuals mother, father, and their offspring). -
Parasite Burden and Feeding Habits of Raccoon Dogs
In this study the parasitization and feeding ecology of invasive raccoon dogs in Germany were examined. Results show a diverse parasite fauna as well as diet. It underlines the... -
Dual RNA-seq analysis of pig alveolar macrophage infected with china-isolated...
Toxoplasma gondii is an apicomplexan parasite infecting human and animals, causing huge health concerns and economic losses. However, it is unclear about the exact mechanism of... -
Penaeus vannamei Raw sequence reads
Transcriptional analysis had been taken to fish out the main differential expressed genes under the cold temperature in the white shrimp. -
Sus scrofa Raw sequence reads
This study aimed to investigate the effects of maternal methyl-donor micronutrient supplementation during gestation on growth performance, gut microbiota and fecal metabolic... -
Dual RNA-seq analyses of porcine alveolar macrophage and Toxoplasma during in...
Purpose:This study was aimed to profile the transcriptome changes during Toxoplasma infection with porcine alveolar macrophages. for this purpose, Porcine alveolar macrophages... -
There are 18 ready-to-eat food samples (8 ready-to-eat meat, 7 ready-to-eat v...
Ready-to-eat (RTE) foods have been considered to be an important reservoir of AR bacteria, which constitutes a direct threat to human health, but this remains largely... -
Large scale metagenome assembly reveals novel animal-associated microbial div...
Large-scale metagenome assemblies of human microbiomes have produced a huge catalogue of previously unseen genomic data, but has been applied to only a few of the >66 000... -
Endothelial Gene Expression in Regions of Defined Shear Exposure in the Porci...
The effect of hemodynamic shear stress on endothelial gene expression was investigated in the porcine iliac arteries. Computational fluid dynamics simulations identified three... -
Transcriptomic and lipidomic profiling of subcutaneous and visceral adipose t...
Transcriptomic and lipidomic profiling of subcutaneous and visceral adipose tissues in 15 vertebrates -
Occurrence of mammalia relicts at site Felsställe
This dataset has no description
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Occurrence of mammalia relicts at site Gare de Couze-Serie 2
This dataset has no description
