43,941 datasets found

Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States

The study explores the indirect impact of climate change driven by Gentoo penguin colonization pressure on the microbial communities of moss banks formed by Tall moss turf...

Marine viral communities from the Deep Pacific Ocean - MSP-121 metagenome

Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II: from individual species to whole genera

Microorganisms throughout the dark ocean use reduced sulfur compounds for chemolithoautotrophy. In many deep-sea hydrothermal vents, sulfide oxidation is quantitatively the most...

Iron is essential for almost all organisms, but can be toxic in excess. Cells use regulatory mechanisms to control the iron uptake, iron utilization and iron release mechanisms...

We sampled seawater from the surface and 50m (day and night) at several sites throughout Nago Bay, Okinawa in order to investigate small-scale variation in eukaryote community...

The full length transcriptome of coelomic fluid cells of Apostichopus japonicus was obtained based on the third generation sequencing platform of pacbio sequel.

Holoproteome analyses characterizing dynamic coral-algae-microbe biotic interactions under ocean acidification

Biomaterial provider: Joseph Ryan<br><hr> SPAdes preassembly <br> Decontaminated FSCR<br> Decontaminated gx<br> Zanfona<br> Accession:...

Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico

Scleractinian corals’ microbial symbionts influence host health, yet how these coral microbiomes assembled over evolution is not well understood. We survey bacterial and...

Oxygen Deficient Zones are areas of the ocean that have <10 nM oxygen. These samples were obtained on the RV Thompson in April of 2012.

RNA-seq samples of red king crab larvae taken immediately after hatching and after 7 days of development. For samples taken immediately after hatching, females brooded embryos...

Draft genome sequences of Campylobcter jejuni isolated from chicken meat products retailed in Japan were analyzed.

The microbial community of the Bay of Bengal (the northeastern Indian Ocean) was determined using the V4 region of the 16S rRNA amplicon sequencing.

Biomaterial provider: Daniel Geiger<br><hr> SPAdes preassembly<br> Decontaminated FSCR<br> Decontaminated gx<br> Zanfona<br> Accession:...

Illumina bacteria and archaea 16S rRNA genes

Analysis of nifH gene diversity from four Arctic regions (rivers, seawater and sediment traps) during 2014 and 2019

Fungal communities inhabiting three distinct substrates (bare lava lava underneath a bird cliff with abundant gull deposits and sand-filled lava deposits) were analyzed using...