500 datasets found

Genotyping and phenotyping data of BWP3 diversity panel

These datasets include the phased assemblies of the Charolais breed bovine genome that were performed using both the Parent-HiFi and the Hi-C-HiFi methods. The Research...

this dataset contains the transcript and protein assemblies for Aconitum napellus, Clematis stans, Ficaria verna, Helleborus orientalis and Nigella damascena inferred from de...

Contains data from Transposable Elements (TEs) annotation of Lymnaea stagnalis genome (scaffolded V1.0), a freshwater hermaphroditic snail. This species is a model organism in...

The data set contains raw sequencing reads (Illumina NovaSeq6000, PE150 mode) of the genomic DNA of mutant phages (T4mut_alpha-gt and T4mut_beta-gt) that were constructed in...

Atmospheric visibility, or meteorological visibility, is an important information for high-stake applications, such as transport safety and air quality. It is normally monitored...

RMQS: The French Soil Quality Monitoring Network (RMQS) is a national program for the assessment and long-term monitoring of the quality of French soils. This network is based...

Fastq files for the transcriptome of colon samples of a DNBS colitis model.

Hypothalamic metabolomic (UHPLC MS/MS) and caecal microbiota (16S rRNA) and metabolomic data (GC MS/MS) obtained from rats under chow or Western diet (WD). Data were collected...

Characterization of the fecal metagenome from a healthy human donor with the PacBio HiFi sequencing technology

This database is an adaptation for DADA2 of Diat.barcode v9. Length of sequences is 263 bp ------------------------- Rimet, Frederic; Chonova, Teofana; Gassiole,...

Dataset overview We built an updated catalog of 9.3M genes found in the pig gut microbiota. Co-abundant genes were binned in 1523 Metagenomic Species Pan-genomes (MSPs) for...

Data and R-code used in the paper Nonlinear Effects Induced by Interactions among Functional Groups of Bacteria and Fungi Regulate the Priming Effect in Malagasy Soils, by...

Dataset overview The MIMIC2 dataset provides: a non-redundant high-quality catalog of 5.0 million genes 6,967 Metagenome-Assembled Genomes (MAGs) 1,252 Metagenomic Species...

Two bash scripts are provided to automated sequence-base microsatellite genotyping from data sequences generated by amplicon sequencing (SSRseq, SSR-GBS or similar approaches as...

The database of streamflow and groundwater level data is composed of the daily data of 107 catchments and 355 piezometers, associated into 456 catchment/piezometer pairs. It was...

This dataset archive includes analysis files for the paper "Europe as a bridgehead in the worldwide invasion history of the grapevine downy mildew, Plasmopara viticola",...

R-codes used in the paper "Consistent functional clusters explain the effects of biodiversity on ecosystem productivity in a long-term experiment", by Benoît Jaillard, Philippe...

Le package "slakestable" permet de formater rapidement les données brutes issues de l'application pour smartphone "Slakes" (Fajardo et al., 2016). La fonction "tablecourbe"...

DWGSIM (v 0.1.13) has been used to simulate shotgun metagenomics short reads from Illumina sequencing platforms. 52,8 millions of paired-ends reads were extracted from 32...