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IntOGen - Pipeline
Analyses somatic mutations in thousands of tumor genomes to identify cancer driver genes. Requirements: IntOGen depends on Python 3.4 or above and some python libraries. If you... -
OncodriveFML
Method to identify genomic regions, both coding and non-coding, bearing mutations with significant shift towards high functional impact across a cohort of tumos (FMbias), which... -
OncodriveMUT
Bioinformatics method to identify individual driver mutations. INSTALL Create a new Anaconda python environment with all the required dependencies $ conda create -c bioconda -c... -
TCGI prescription
CGI drug prescription assigns targeted drugs to a tumor, based on its genomic alterations, according different levels of evidence (from pre-clinical assays to clinical... -
itab
Python tab files parsing and validating schema tools. -
OncodriveRole
Machine-learning based approach to classify cancer driver genes into to Activating or Loss of Function roles for cancer gene development. -
OncodriveFM
OncodriveFM detects candidate cancer driver genes and pathways from catalogs of somatic mutations in a cohort of tumors by computing the bias towards the accumulation of... -
OncodriveCLUST
OncodriveCLUST is a method aimed to identify genes whose mutations are biased towards a large spatial clustering. This method is designed to exploit the feature that mutations... -
Oncodrive-CIS
Oncodrive-CIS is a method aimed to identify those copy number alterations (CNAs) leading to larger in cis expression changes that may be useful in elucidating the role of these... -
Replication Data for: "Flexible graphene-based neurotechnology for high-preci...
Deep brain stimulation (DBS) is a neuroelectronic therapy for the treatment of a broad range of neurological disorders, including Parkinson's disease. Current DBS technologies...
