Non-Hemolytic and Non-Toxic AMPs from Cephalopods' Posterior Salivary Glands: Singular Set and Sets with Similarity to Characterised AMPs

The datasets presented here are the result of a comprehensive comparison involving 68,694 non-hemolytic and non-toxic Antimicrobial Peptides (AMPs) extracted from the posterior salivary glands of Cephalopods (doi: 10.17632/htntmccyd4.1). The comparison was made against characterized AMPs registered in the StarPep database (http://mobiosd-hub.com/starpep/)Dataset Structure:The provided datasets, available in FASTA file format, are structured as follows:1.Singular NoHemNoTox AMPs (5,466): AMPs from cephalopods that are non-hemolytic and non-toxic, exhibiting less than 40% sequence identity with members in the StarPep database.2.NoHemNoTox AMPs_SimHigher40 (63,228): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing more than 40% sequence identity with members in the StarPep database.3.NoHemNoTox AMPs_Sim40-50 (26,744): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing 40-50% sequence identity with members in the StarPep database.4.NoHemNoTox AMPs_Sim50-60 (30,217): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing 50-60% sequence identity with members in the StarPep database.5.NoHemNoTox AMPs_Sim60-70 (5,716): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing 60-70% sequence identity with members in the StarPep database.6.NoHemNoTox AMPs_Sim70-80 (453): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing 70-80% sequence identity with members in the StarPep database.7.NoHemNoTox AMPs_SimHigher80 (98): AMPs from cephalopods that are non-hemolytic and non-toxic, sharing more than 80% sequence identity with members in the StarPep database.These datasets provide a valuable resource for screening purposes as part of the peptide drugs discovery, especially considering their similarities to the known chemical space (characterized AMPs in the StarPep database).

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Identifier
DOI https://doi.org/10.17632/8mttp4pvmc.1
PID https://nbn-resolving.org/urn:nbn:nl:ui:13-vt-rvbv
Metadata Access https://easy.dans.knaw.nl/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=oai:easy.dans.knaw.nl:easy-dataset:322233
Provenance
Creator Perez-Machado, G
Publisher Data Archiving and Networked Services (DANS)
Contributor Gisselle Perez-Machado
Publication Year 2023
Rights info:eu-repo/semantics/openAccess; License: http://creativecommons.org/licenses/by/4.0; http://creativecommons.org/licenses/by/4.0
OpenAccess true
Representation
Resource Type Dataset
Discipline Other