Individual codes, GenBank accession numbers and GenBank accession links for sponge-associated actinobacterial isolates

DOI

Here, we report the draft genome sequences of three actinobacterial isolates, Micromonospora sp. RV43, Rubrobacter sp. RV113, and Nocardiopsis sp. RV163 that had previously been isolated from Mediterranean sponges. The draft genomes were analyzed for the presence of gene clusters indicative of secondary metabolism using antiSMASH 3.0 and NapDos pipelines. Our findings demonstrated the chemical richness of sponge-associated actinomycetes and the efficacy of genome mining in exploring the genomic potential of sponge-derived actinomycetes.

Supplement to: Horn, Hannes; Hentschel, Ute; Abdelmohsen, Usama Ramadan (2015): Mining Genomes of Three Marine Sponge-Associated Actinobacterial Isolates for Secondary Metabolism. Genome Announcements, 3(5), e01106-15

Identifier
DOI https://doi.org/10.1594/PANGAEA.855522
Related Identifier https://doi.org/10.1128/genomeA.01106-15
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.855522
Provenance
Creator Horn, Hannes ORCID logo; Hentschel, Ute (ORCID: 0000-0003-0596-790X); Abdelmohsen, Usama Ramadan ORCID logo
Publisher PANGAEA
Publication Year 2015
Rights Creative Commons Attribution 3.0 Unported; https://creativecommons.org/licenses/by/3.0/
OpenAccess true
Representation
Resource Type Supplementary Dataset; Dataset
Format text/tab-separated-values
Size 21 data points
Discipline Earth System Research
Spatial Coverage (13.638 LON, 45.081 LAT)