49 datasets found

Background: The human gut is densely populated with archaea, eukaryotes, bacteria and their viruses, such as bacteriophages, that play also a prominent role. Recent advances in...

Anal cancer is a leading neoplasia in HIV-infected MSM.We aimed to identify in MSM a set of anal-associated bacterial biomarkers for the diagnosis of biopsy-proven HSIL (bHSIL)....

Plates 74, 75, 78, 80, 72 - all fecal

Maturation of the gut microbiota (GM) in infants is critically affected by environmental factors, with potential long-lasting clinical consequences. Continuous low-dose...

Ileostomy bag content was collected on different occasions and submitted to different DNA extraction methods, before being characterised by both 16S and metagenomic sequencing.

Gut microbiome community structure is associated with Crohn’s disease (CD) development and response to therapy. Bile acids (BAs) play a central role in modulating intestinal...

Most children with leukemia and lymphoma experience febrile neutropenia. These are treated with empiric intravenous antibiotics that include ß-lactams and/or vancomycin. These...

Treatment of pediatric acute lymphoblastic leukemia (ALL) with pegaspargase exploits ALL cells dependency on asparagine. Pegaspargase depletes asparagine, consequentially...

Crohn's disease patients underwent one of two nutritional therapy regimes and were tracked for changes in their gut microbiome over the course of these treatments.

The risk of anal cancer is markedly increased (40–130 fold) in HIV-infected subjects, especially among men who have sex with men (MSM) and in women with history of anogenital...

The gut microbiome of three different cohorts of patients - micro-GIST, low risk (LR) and high risk (HR) GIST - were investigated by using metabarcoding

Retrospective study to characterize the fecal virome for comparison of viral metagenomics approaches. Stool samples from 10 healthy adults, carriers of Lynch syndrome mutations...

Stool samples from 30 consecutive patients with AAA before aneurysm repair and 30 controls without vascular diseases were analyzed by 16S rRNA gene (V3-4) sequencing using...

A total of 41 fecal samples and biopsies from 12 control individuals and 12 Crohn's disease patients were collected. - Samples from the control group consisted exclusively of...

We studied men were HIV-infected undergoing screening for HPV-related precancerous lesions. We analyzed the microbiota composition of biopsy and fecal samples. We obtained the...

The aim of this study was to characterize the saliva microbiota from HIV subjects and the effect of a prebiotic administration.A cohort of HIV viremic untreated patients,...

To investigate the transgenerational impacts of parental food additive intake on intestinal outcomes of offspring mice, germ free male and female mice were transplanted with...

This project described a novel high throughput single bacteria sequencing method.

Ecological and evolutionary alteration in the GD intestinal microbiome part06

MG_baby timeseries