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Umbelopsidales and Mucorales genomes
We sequenced the genomes of six Mucoromycotina fungi representing distant saprotrophic lineages within the subphylum (i.e. Umbelopsidales and Mucorales). We selected two... -
Mycobacterium tuberculosis strain:GC1237 Raw sequence reads
The identification of chromosomal loci associated with pathogensis in dendritic cells -
Exploring the long-term colonisation and persistence of probiotic-prophylaxis...
Exploring the long-term colonisation and persistence of probiotic-prophylaxis species on the gut microbiome of preterm infants: a pilot study -
Amanita phalloides transcriptome
The fungus Amanita phalloides is an exemplary case of multiple invasions by an ectomycorrhizal species. We are sequencing the transcriptome from sporocarp for genome annotation -
soil metagenome Raw sequence reads
divergence of soil microbial community composition -
Comparative analysis of the mycorrhizal associations established by Struthiop...
The present study compares the mycorrhizal communities associated with 36 populations of Struthiopteris spicant L. Weiss across Europe and the United States, following an... -
soil metagenome Raw sequence reads
divergence of fungal comminity structure -
Oribatid mite draft assemblies for comparing effectiveness of selection
Oribatid mite transcriptome assemblies using pooled individuals from natural populations for comparisons of effectiveness of selection between asexual and sexual species -
Pure culture of lichen forming fungus Evernia prunastri
The metagenome skimming approach, i.e. low coverage shotgun sequencing of multi-species assemblages and subsequent reconstruction of individual genomes is increasingly used for... -
Earth Microbiome Project Multi-omics (EMP500)
The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial... -
soil metagenome Raw sequence reads
the effects of N addition and litter addition on soil fungal community composition -
Fungus in decay wood Targeted Locus (Loci)
Investigation of relationship between fungal diversity and wood decay rate. DNA were extracted from drill dust of decay-wood pieces placed in the Ailao Mountains National Nature... -
Microbial communities were sampled across a land-sea continuum to investigate...
Microbial communities play integral roles in biogeochemical cycles through coupled metabolic processes that give rise to higher order ecosystem functions and services. Their... -
Xylaria grammica strain:IHI A82 Genome sequencing and assembly
Xylaria grammica is a saprobic ascomycete mainly thriving on deadwood. The involved enzymes may have relevance in industrial applications. -
marine metagenome Metagenome
To study the effect of diesel oil spills on microbial communities in the monitored basin experiment -
Microsatellite sequencing of Streaked Shearwaters
We established 75 new molecular markers useful for parental analysis of streaked shearwater (Calonectris diomedea) by screening genomic DNA libraries enriched for microsatellite... -
soil fungal community composition Raw sequence reads
divergence of soil fungal microbial community composition -
Exploring the taxonomic composition of two fungal communities on the Swedish ...
The fungal communities of two coastal marine environments of the Kattegat sea, Sweden, were explored with metabarcoding techniques using the nuclear ribosomal internal... -
Population Genomics of Amanita phalloides
The fungus Amanita phalloides is an exemplary case of multiple invasions by an ectomycorrhizal species. We are interested in investigating multiple aspects of the species'... -
Testing the effect of pollen exine rupture on metabarcoding with Illumina seq...
Mixed mock community samples of pollen with various morphologies were subjected to varying levels of mechanical disruption of the protective exine layer prior to DNA extraction...
