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Marine biofilm bacterial community structure after exposure to oil spill cont...
Steel marine structures, including shipwrecks, provide foci of biodiversity when they develop into artificial reefs. Development begins with deposition of a biofilm. The effects... -
Evaluation of PCR conditions for characterizing bacterial community with full...
Our study concerns the reliability of techniques for obtaining accurate and quantitative full-length 16S rRNA amplicon sequencing data on bacterial community structure with... -
Marine biofilms over antifouling surfaces in the Toulon Bay
This study aimed at the description of marine biofilms developped over antifouling surfaces under different shear stress incubations in the Toulon Bay (and in the SOLA... -
HOLOGREEN
Bacterial diversity associated with Ulva cultures -
Environmnental metabarcoding multiplex trial
Environmental DNA metabarcoding data from different environmental matrices amplified with 16S, 18S and rbcL as singleplexes or combined into a multiplex. -
Atlantic Salmon samples for microbiome and resistome studies from the CIRCLES...
The data in this project is part of CIRCLES: Controlling mIcRobiomes CircuLations for bEtter food Systems. CIRCLES is a European Union Horizon 2020 research and innovation... -
Microbiome of Zostera marina seagrass in the Baltic Sea
Eelgrass (Zostera marina) is a marine foundation species essential for coastal ecosystem services around the northern</p><p>hemisphere. Like all macroscopic... -
PacBio sequencing of 16S-ITS-23S rRNA operon amplicons
Amplicon sequencing of the 16S rRNA gene is the predominant method to quantify microbial compositions and to discover novel lineages. However, traditional short amplicons often... -
Deepwater Horizon spill impacts to marine biofilm microbiomes in historic shi...
This study is part of the Gulf of Mexico-Shipwreck Corrosion, Hydrocarbon Exposure, Microbiology, and Archaeology (GoM-SCHEMA) Study. The natural breakdown of wooden and... -
Benthic stream biofilm Targeted Locus (Loci)
Benthic biofilm communities in relation to varying organic matter concentrations -
Impacts of crude oil and chemical dispersant exposure on marine microbial bio...
The release of hydrocarbons and dispersants in the marine environment may place at risk the preservation of historic steel shipwrecks on the seafloor. In this study, we exposed... -
Environmental Metagenome
Microbial Ecology diversity of natural habitats -
uncultured prokaryote Targeted loci environmental
Survey of biofilm bacterial community diversity (16S rRNA) in New Zealand streams -
Succession of bacterial communities during a 6-month biofouling experiment in...
The development of a mature biofouling community on solid surfaces in the marine environment primarily involves the availability of colonizing bacterial communities and their... -
Baltic Sea plastic biofilms and reference communities, raw sequence reads
Microplastics (PE, PS) and wooden pellets were incubated for 2 weeks along a salinity gradient in the Baltic Sea and river Warnow, Germany. Developing biofilm communities were... -
Microbial community structure and settlement induction capacity of marine bio...
This project aims to investigate the effects of a nutrient gradient associated with mariculture on prokaryotic and eukaryotic components of the marine biofilm community and... -
Microbial community composition and function at Tor Caldara, a shallow-water ...
Shallow-water gas/hydrothermal vents are widespread in the world's oceans but remain understudied. In this study, we investigate the microbial communities at Tor Caldara, Italy,... -
Close encounters on a micro scale: Microplastic sorption of polycyclic aromat...
Within systems as dynamic as the aquatic environment, it is paramount to address the impacts of an ever growing network of emerging pollutants at their intersection. With... -
Genomics and transcriptomics of enrichment cultures of marine methanotroph
The Iheya North Knoll in the mid-Okinawa Trough is a methane-rich deep-sea hydrothermal field. To cultivate methane-oxidizing bacteria from the Iheya North field, a continuous...
