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Foliar fungal and bacterial communities of tree species in French Guiana.
This dataset gathers bacterial 16s and fungal ITS sequences describing the microbiota of several tree species in French Guiana . Leaf samples were collected in three sites... -
Data of the submitted paper "Environmental matrices need consideration: insig...
Genetic sequences (FASTQ) of algae (23S) (MiSeq), macroinvertebrates (COI) and fish (12S) (NovaSeq) from biofilm and water samples collected in Anthy-sur-Léman (France) in... -
Absolute abundance data for the BCMicrobiome project.
The aim of the projet was to identify microbial antagonists of Plasmopara viticola, the causal agent of downy mildew in European cultivated grapevine (Vitis vinifera L.), by... -
Metabarcoding data analysis of fungal communities associated with pedunculate...
In this study, we analyzed the diversity and composition of fungal communities collected from leaves of pedunculate oak (Quercus robur) and needles of maritime pine (Pinus... -
Metabarcoding data analysis of foliar fungal communities associated with 84 w...
These metabarcoding data describe foliar fungal communities collected on 84 woody species planted at the Arboretum des Barres (Nogent-sur-Vernisson, France, 47.83819 N , 2.75792... -
Metabarcoding data analysis of fungal communities associated with 203 full-si...
In this study, we consider the diversity and composition of the fungal communities collected on 203 full-sib Quercus robur individuals. Adult trees are located in the Bourran... -
Unmodified foraminiferal raw eDNA data in form of 'reads' with ASV, OTU and t...
The eDNA analysis was done using a DNeasy® PowerLyzer PowerSoil Kit (QIAGEN), processed using the DADA2 pipeline and the taxonomic assignations were estimated using a sequence... -
Functional traits of marine protists
We combined the metabarcoding data of various coastal ecosystems and a newly developed trait-based approach to study the link between taxonomic and functional diversity across... -
Taxonomic assignment of the ISU for the 334 PCR products (Table S3)
This dataset has no description
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List and processing details of the selected samples of the study for metabarc...
This dataset has no description
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List, processing details and taxonomic counts of planktonic foraminifera for ...
This dataset has no description
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Oomycete diversity determined via metabarcoding in two embayments in the Orkn...
Water sampling was carried out weekly between April and October 2016. Water samples were taken from two shallow sites (less than 5 km apart) in the Orkneys. Sampling was done... -
Planktonic foraminifera eDNA signature deposited on the seafloor remains pres...
Environmental DNA (eDNA) metabarcoding of marine sediments has revealed large amounts of sequences assigned to planktonic taxa. How this planktonic eDNA is delivered on the... -
Plant diversity in sedimentary DNA obtained from high-latitude (Siberia) and ...
Compilation of environmental data for the 262 investigated localities, which include additional intra-lake localities taken within three large lakes namely: 16-KP-01-L02 (9... -
Net sampling to assess the cephalopod biodiversity of Cabo Verde
Net catches of cephalopods were obtained during the cruises POS320/2 (March 2005), MSM49 (November/December 2015) and WH383 (March/April 2015) off Cabo Verde at a total of 18... -
In situ video observations to assess the cephalopod biodiversity of Cabo Verde
Pelagic video transects with the Pelagic In-Situ Observation System (PELAGIOS, (Hoving et al., 2019a)) were conducted during the cruises MSM49 (Christiansen et al., 2016)... -
An integrative assessment combining net sampling, in situ observations and eD...
Net catches of cephalopods were obtained during the cruises POS320/2 (March 2005), MSM49 (November/December 2015) and WH383 (March/April 2015) off Cabo Verde at a total of 18... -
Operational taxonomic units of deep-sea fishes from environmental DNA collect...
Analysis of fish environmental DNA (DNA traces released into the environment in form of tissue, mucus, feces, etc.) from several oceanic vertical profiles (from the surface up... -
eDNA analysis to assess the cephalopod biodiversity of Cabo Verde
Onboard, cephalopods were identified morphologically to the lowest taxonomic level possible (species, genus or family), and whole specimens were preserved in formalin as... -
Replication Data for: Invert emulsions alleviate biotic interactions in bacte...
The large application potential of microbiotas has led to a great need for mixed culture methods. However, microbial interactions can compromise the maintenance of biodiversity...