Multi-electrode array recording from salamander retinal ganglion cells

DOI

This data was collected as part of the study [1]. It consists of preprocessed multi-electrode array recording from 160 salamander retinal ganglion cells responding to 297 repeats of a 19 s natural movie. The data is available in two formats: (1) a .mat file containing an array with dimensions “number of repeats” x “number of neurons” x “time in a repeat”; (2) a zipped .txt file containing the same data represented as an array with dimensions “number of neurons” x “number of samples”, where the number of samples is equal to the product of the number of repeats and timebins within a repeat. The time dimension is divided into 20 ms time windows, and the array is binary indicating whether a given cell elicited at least one spike in a given time window during a particular repeat. See the reference below for details regarding collection and preprocessing:

[1] Tkačik G, Marre O, Amodei D, Schneidman E, Bialek W, Berry MJ II. Searching for Collective Behavior in a Large Network of Sensory Neurons. PLoS Comput Biol. 2014;10(1):e1003408.

Identifier
DOI http://dx.doi.org/doi:10.15479/AT:ISTA:61
Source https://datarep.app.ist.ac.at/61/2/bint_fishmovie32_100.zip
Related Identifier {https://datarep.app.ist.ac.at/61/}
Metadata Access http://datarep.app.ist.ac.at/cgi/oai2?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai:datarep.app.ist.ac.at:61
Provenance
Creator Berry, Michael J, II;Schneidman, Elad;Amodei, Dario;Bialek, William;Tkacik, Gasper;Marre, Olivier
Representation
Resource Type Data Collection
Format archive;dataset
Coverage
Discipline Not stated