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Statistical analysis scripts to analyze metabarcoding data of fungal communit...
This archive provides the statistical analysis scripts used to analyze a metabarcoding dataset (available at https://www.ncbi.nlm.nih.gov/bioproject/678415) representing foliar... -
Supplemental data for "Open-source 3D printable frameless stereotactic system...
This dataset includes as a zip archive all the tools related to the paper entitled "Open-source 3D printable frameless stereotactic system for young and adult pigs" -
Protocole de dépôt en open-access des données de séquençage sur une plateform...
La qualité écologique des milieux aquatiques est contrôlée avec une large palette d’outils normalisés. Parmi ces outils, il y a les bioindicateurs, tels que les microalgues et... -
Genetics and Grain-Legumes WoS DataSet 1980-2018
The text file corresponds to the search query capturing the main genetics research theme on grain-legumes (both soya and pulses, see Species Grain-Legumes WoS dataset) to be... -
Instructions for use SS4I Software
Instructions for use SS4I Software -
Growth data for 26 provenances of Quercus petraea and Q robur at three common...
The dataset is composed of 5 columns and 1140 lines: “Garden” is the code for the common garden: 1 is for “Petite Charnie” (western France), 2 for “Vincence” (center of... -
Synthetic dataset used for validating srnadiff
This dataset contains all the mapped reads generated to validate the tool srnadiff on a synthetic dataset, where the "truth" is known. Samples 1 to 6 are supposed to be one... -
Mapping of known effector genes on five Meloidogyne genomes
Based on the literature, we established a manually curated list of M. incognita genes specifically expressed in sub-ventral or dorsal secretory gland cells. We started from the... -
FlintDent GWAS dataset
This dataset corresponds to the data associated with the study: "Disentangling group specific QTL allele effects from genetic background epistasis in GWAS: an application to... -
An updated catalog of genes and species of the pig gut microbiota
Dataset overview We built an updated catalog of 9.3M genes found in the pig gut microbiota. Co-abundant genes were binned in 1523 Metagenomic Species Pan-genomes (MSPs) for... -
Genoscapist
Genoscapist is a web-tool generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various... -
Ancestral reconstruction of the origin of M. incognita effectors in the Meloi...
Based on the mapping of non-redundant known M. incognita subventral (SvG) and dorsal (DG) gland effectors on the genomes of five Meloidogyne species ancestral numbers were... -
Scenarios for the introduction of environmental DNA-based tools in aquatic bi...
The French-Swiss project SYNAQUA (INTERREG France-Switzerland 2017-2019) focuses on the development and the validation of genomic tools for water quality biomonitoring based on... -
A large panel of chicken cells are invaded in vivo by Salmonella Typhimurium ...
Poultry are the main source of human infection by Salmonella. As infected poultry are asymptomatic, the identification of infected poultry farms is difficult. Controlling animal... -
R-Syst: a network providing curated molecular databases and data analysis too...
R-Syst network deals about systematic and (meta) barcoding and provide curated molecular databases for species identification and provide tools for diagnosis and inventories.... -
Raw phenotypic data obtained on the Arabidopsis RILs with the Phenoscope robo...
This dataset gathers the main raw phenotypic data obtained and exploited in Marchadier, Hanemian, Tisné et al. (2019). It contains data from 4 RIL sets across 9 Phenoscope... -
Supplementary tables to manuscript: “Comparison of double-stranded RNA (dsRNA...
Supplementary tables to manuscript in Chapter 2 -
CIRM - BP : Plan de Gestion des Données
Plan de Gestion des Données du CIRM-BP (Bactéries Pathogènes) -
Japanese plum small RNA sequencing
Deep sequencing of non-transgenic and eIFiso4G-silenced transgenic Japanese plum (Prunus salicina) small RNA libraries. Cultivar Angeleno. Files are in fastq format, compressed... -
Root water status in three contrasted herbaceous species grown in rhizotrons
This dataset contains NMR and ecophysiological data that support the findings of a manuscript “Circadian variation of root water status in three herbaceous species assessed by...