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MetaColi dataset
The Metacoli project aimed at understanding the metabolic response of a variety of E. Coli bacterial strains to different culture media. Here we provide the raw datasets of... -
Greywater data from rural household of Sahelian region (Noungou, Koubri, Burk...
Mixed greywater (laundry, dishwashing and shower) was collected from a rural household of Noungou, Burkina Faso. The collected greywater was treated in situ through a horizontal... -
Greywater data from urban households in Ouagadougou (Burkina Faso) and its co...
Mix greywater (laundry and dishwashing) were collected three times a week, from six representative households located in Zogona district of Ouagadougou (Burkina Faso) and... -
RT-qPCR_Fluidigm
Quantification of the gene expression in a strain collection of Escherichia coli containing AIEC (Adherent Invasive Escherichia coli) and non-AIEC (non-Adherent Invasive... -
Antioxidant and antimicrobial activities of ginseng extract (GE), ferulic aci...
Ginseng extract (GE), ferulic acid (≥ 99%) (FA), and a fermented noni juice powder (FNJP), were investigated for their antioxidant and antimicrobial activities in vitro. For... -
Comparative transcriptomics of the strain pairs AIEC/non-AIEC
Dataset of comparative transcriptomics between Adherent Invasive Escherichia coli (AIEC)/non-Adherent Invasive Escherichia coli (non-AIEC) strain pairs. The dataset contains... -
Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-l...
This repository contains the data collected for the manuscript "Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity". The... -
Data for the paper "Gene amplification as a form of population-level gene exp...
Organisms cope with change by employing transcriptional regulators. However, when faced with rare environments, the evolution of transcriptional regulators and their promoters... -
Sequences of gene regulatory network permutations for the article "Local gene...
Gene expression levels are influenced by multiple coexisting molecular mechanisms. Some of these interactions, such as those of transcription factors and promoters have been... -
Analysis scripts and research data for the paper "Minimal biophysical model o...
Phenomenological relations such as Ohm’s or Fourier’s law have a venerable history in physics but are still scarce in biology. This situation restrains predictive theory. Here,... -
Analysis scripts and research data for the paper "Mechanisms of drug interact...
Antibiotics that interfere with translation, when combined, interact in diverse and difficult-to-predict ways. Here, we explain these interactions by "translation bottlenecks":... -
Association patterns among physical, chemical and microbiological indicators ...
Concern about the quality of water consumed by rural communities leads to caution regarding the interference of variables in potability. This study aimed to verify the linear... -
Characterizing and utilizing oxygen-dependent promoters for efficient dynamic...
This collection contains DNA sequences of plasmids constructed for the research article "Characterizing and utilizing oxygen-dependent promoters for efficient dynamic metabolic... -
Characterizing and utilizing oxygen-dependent promoters for efficient dynamic...
This collection contains DNA sequences of plasmids constructed for the research article "Characterizing and utilizing oxygen-dependent promoters for efficient dynamic metabolic... -
Comparison of fecal indicators with pathogenic bacteria and rotavirus in rura...
Groundwater is routinely analyzed for fecal indicators but direct comparisons of fecal indicators to the presence of bacterial and viral pathogens are rare. This study was... -
Réseau de surveillance sanitaire des sites de pêche à pied récréative en Bret...
Surveillance de la contamination fécale (ecolis) sur les gisements naturels de coquillage (Coques, palourdes, huitres moules) fréquentés par les pêcheurs à pied amateurs....