Collecting information and identification of New England Seamount Geodia species

DOI

We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temperate species (Geodia megastrella). These records extend the distributions of these deep-sea amphi-Atlantic species to the west. Most of these specimens were originally fixed in formalin, which substantially degraded the DNA. We nonetheless managed to sequence two cytochrome c oxidase subunit I (COI) mini-barcodes: the universal mini-barcode at the 5' end of the Folmer barcode (130 bp) and a newly proposed mini-barcode at the 3' end of the Folmer barcode (296 bp). These mini-barcodes unambiguously confirmed our identifications. As an additional test, we also successfully sequenced these two mini-barcodes from the holotype of G. barretti, collected in 1855. We conclude by advocating the use of mini-barcodes on formalin-fixed or old specimens with degraded DNA.

This dataset gives the collecting information of New England Seamount Geodia species from the Yale Peabody Museum. Museum numbers, fixation processing and Genbank accession numbers are also given.

Supplement to: Cárdenas, Paco; Moore, Jon A (2017): First records of Geodia demosponges from the New England seamounts, an opportunity to test the use of DNA mini-barcodes on museum specimens. Marine Biodiversity, 12 pp

Identifier
DOI https://doi.org/10.1594/PANGAEA.867276
Related Identifier https://doi.org/10.1007/s12526-017-0775-3
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.867276
Provenance
Creator Cárdenas, Paco ORCID logo; Moore, Jon A ORCID logo
Publisher PANGAEA
Publication Year 2016
Funding Reference Horizon 2020 https://doi.org/10.13039/501100007601 Crossref Funder ID 679849 https://cordis.europa.eu/project/id/679849 Deep-sea Sponge Grounds Ecosystems of the North Atlantic
Rights Creative Commons Attribution 3.0 Unported; https://creativecommons.org/licenses/by/3.0/
OpenAccess true
Representation
Resource Type Supplementary Dataset; Dataset
Format text/tab-separated-values
Size 95 data points
Discipline Earth System Research
Spatial Coverage (-67.481W, 33.753S, 10.790E, 64.710N); New England Mountains; South Atlantic Ocean; Norway
Temporal Coverage Begin 1855-08-06T00:00:00Z
Temporal Coverage End 2005-10-28T00:00:00Z